The Newborn Nursery and the Neonatal Intensive Care Unit
The Newborn Nursery and the Neonatal Intensive Care Unit
Thomas J. Sandora
Nalini Singh
The newborn nursery includes healthy, full-term infants who weigh ≥2,000 g at birth in the normal newborn areas as well as high-risk infants who weigh <2,000 g at birth and are term infants but have complex medical problems in the neonatal intensive care unit (NICU). These infants have an increased risk of acquiring infection because all components of their host defense system are deficient compared with those of older children or adults, and the severity of these deficiencies is increased as gestational age decreases (1). The survival of prematurely born infants has improved as a result of more advanced high-risk obstetrical care and neonatal supportive care, including the use of surfactant replacement for the treatment of hyaline membrane disease, mechanical ventilation including conventional and high-frequency ventilation, extracorporeal membrane oxygenation (ECMO) and continuous hemofiltration to support cardiopulmonary and renal function, noninvasive ventilation (e.g., continuous positive airway pressure [CPAP]) and cardiac intervention techniques, improved surgical techniques, and screening and chemoprophylaxis for early-onset group B streptococcal (GBS) disease. Therefore, increasing numbers of infants of very low birth weight (VLBW, 1,000 to 1,499 g) and extremely low birth weight (ELBW, <1,000 g) are surviving but require prolonged length of NICU stay and are at increased risk for healthcare-associated infection (HAI). The 2010 data summary from the National Healthcare Safety Network (NHSN) of the Centers for Disease Control and Prevention (CDC) (2) reported that ELBW and VLBW infants have the highest rates of central line-associated bloodstream infections (CLA-BSIs) per 1,000 central line-days compared with all other birth-weight categories among infants in level III NICUs; CLA-BSI rates in this group also are higher than in all other NHSN pediatric critical care unit categories (Table 26.1). The rates of infection caused by bacteria and Candida sp. vary considerably among NICUs in the United States (3,4) and Canada (5) even after adjustment for known risk factors that could be practice-related. Identification of practices in the best-performing units followed by widespread implementation has been a successful strategy of the Vermont Oxford Network and other collaboratives to reduce infection rates and other complications associated with NICU care (6,7,8). Device-associated infection rates in the NICU have decreased over time as they have in other ICU types, most likely a reflection of the beneficial effect of consistent implementation of recommended practices, measurement of rates, and feedback to the primary caregivers.
In the absence of in utero infection, the neonate is first exposed to microorganisms during passage through the birth canal. Subsequently, the normal skin and mucous membrane microflora are derived from environmental sources. Healthy, term infants usually have a short hospital stay (often <48 hours). Therefore, infections are acquired infrequently in the normal newborn nursery (<1% of all admissions) and often are not manifest until after discharge, making surveillance particularly challenging. In contrast, VLBW infants often remain in the NICU for several weeks to months with continued exposure to many devices and invasive procedures, antibiotic-resistant hospital flora, and antimicrobial agents that further influence the composition of their microflora. Thus, meaningful analysis of HAI rates in the newborn nursery/NICU must use consistent definitions and risk stratification to account for the heterogeneity of its population. The NICU is the focus of HAI surveillance and prevention because of the associated increase in morbidity and mortality relative to newborn nurseries.
DEFINITIONS
TIME OF ONSET
Various investigators define early-onset disease as positive cultures of a normally sterile body fluid obtained within the first 3, 7, or 10 days of life. For the study of HAIs, the most appropriate time interval is 3 days. Infections that appear at <48 hours of age are considered to be maternally acquired. Approximately 15% of bloodstream infections (BSIs) and pneumonias in high-risk nurseries are maternally acquired (9). Outbreaks of early-onset infections are rarely reported, and have remained either unexplained (10) or have been associated with fetal scalp electrode placement during labor (11), contaminated resuscitation equipment in the delivery room (12,13) or contaminated materials used within the first few hours of life (e.g., hydrocolloid dressings manufactured in large sheets precut by healthcare workers [HCWs] and used to secure umbilical catheters or endotracheal tubes contaminated with Acinetobacter baumannii) (14).
For the purposes of HAI tracking, positive cultures obtained >3 days after birth are considered as late-onset disease. Because the clinical manifestations of infection often are delayed and determining whether an infection was acquired from the mother or from transmission within the nursery is difficult, NHSN reports all infections except those that are transmitted transplacentally as HAIs (9). Differentiation of early- and late-onset disease is most useful when designing prophylaxis regimens. It is recommended that bacterial infections, other than urinary tract infection (UTI), occurring within the first month after discharge from the nursery be reported to the infant’s nursery to facilitate prompt identification of an outbreak (e.g., skin infections associated with Staphylococcus aureus or Streptococcus group A or B, omphalitis, or bacterial diarrhea, especially Salmonella sp.) (12,15,16,17).
TABLE 26.1 Central Line-Associated Bloodstream Infection (CLA-BSI) Ratesain Pediatric Intensive Care Units (ICUs) (2)
a(Number of CLA-BSI/number of central line-days) × 1,000.
bDevice utilization (DU) ratio = number of central line-days/number of patient-days.
cFor NICU, central line-days include umbilical line-days.
DEVICE-RELATED INFECTIONS
Standardized surveillance definitions developed and updated by the CDC are used to track the rates of NICU infections associated with central venous catheters (CVCs), including umbilical catheters, and ventilator-associated pneumonia (VAP) (18).
Studies (19,20,21) have demonstrated the advantages of calculating device-associated HAI rates to control for the duration of exposure to the primary risk factors. Device utilization (DU) ratios are useful for interhospital comparisons as long as each hospital has collected the data and the calculated ratios use the same definitions and methods. The DU ratio is the measure of an ICU’s invasive practices that constitutes an extrinsic risk factor for HAI. The DU ratio can also serve as a marker for severity of illness or the patient’s intrinsic susceptibility to infection. Device-associated infection rates and DU ratios are calculated as follows:
Central line-associated bloodstream infection (CLA-BSI) rate:
Ventilator-associated pneumonia (VAP) rate:
Device utilization (DU) ratio:
SEVERITY OF ILLNESS SCORING SYSTEMS
Measures of illness severity other than birth weight have been applied to the study of neonatal HAI risk since 1993 when several scoring systems were first described (22,23,24,25,26). The Score for Neonatal Acute Physiology (SNAP) uses the worst recorded values of >24 routinely measured physiologic variables during the first 24 hours of stay. The SNAP-Perinatal Extension (SNAP-PE) adds scoring for birth weight, small for gestational age status, and low Apgar score (<7 at 5 minutes). Using multiple regression analysis, a study of coagulase-negative staphylococcal (CONS)-BSIs demonstrated a 53.9% increase in a patient’s risk of experiencing at least one nosocomial BSI episode associated with each 5-point increment in the admission day SNAP (23). These types of scoring systems were developed to predict mortality and are not typically used to risk-adjust HAI rates in the NICU (instead, rates are generally stratified by birth-weight category); further validation would be needed before they could be applied routinely.
DISTINGUISHING TRUE PATHOGENS FROM BLOOD CULTURE CONTAMINANTS
Sepsis caused by pathogens that are common skin contaminants (e.g., CONS) can be associated with low colony counts (27,28,29) and relatively few symptoms. The analysis of sites from which the isolates are recovered (e.g., peripheral blood, specific ports of CVCs) and time to positivity assist the clinician in distinguishing blood culture contaminants from true pathogens or infection. Time to positivity is an indicator of the quantity of bacteria, and is an easily implemented replacement for quantitative blood cultures. When there is a >2-hour difference in time to positivity for various sites, the site that turned positive first is more likely to be the source of the bacteremia or fungemia (30,31,32). The following suggestions can optimize the clinician’s accuracy in distinguishing true sepsis from contamination:
Obtain at least 0.5 to 2 mL of blood for culture from two separate sites (preferably one peripheral site in patients with an intravascular catheter) (27,28,29,30,31,32,33).
Isolates detected within 24 to 36 hours of submission are more likely to be true pathogens. If blood cultures from an asymptomatic neonate who is being evaluated at birth owing to the presence of maternal risk factors remain negative at 36 hours, bacterial sepsis can be ruled out (32).
Sepsis is more likely when a clinical course or serial laboratory studies compatible with sepsis are documented (e.g., elevated absolute total neutrophil [ATN] or absolute total immature cell [ATI] counts, ratio of absolute total immature neutrophils to total neutrophils (I:T) >0.2 (34), and elevated C-reactive protein (35)). The likelihood of sepsis is <1% in the presence of three serial CBC and differential counts that remain normal over 36 hours.
True sepsis is more likely if the patient responds to antimicrobials that are active against the isolate, usually vancomycin for CONS and MRSA. Clinical improvement and/or failure to recover the same pathogen from repeat blood cultures when an infant is being treated with an antimicrobial agent that is not active against the pathogen casts doubt on the validity of that isolate as a true pathogen.
RISK FACTORS FOR HAI
The intrinsic and extrinsic factors for HAI have been reviewed (36), and are summarized in Table 26.2.
INTRINSIC RISK FACTORS
Birth weight and gestational age are the most important risk factors for HAI development. The decreased function of the immune system in the most premature infants accounts for most of the increased intrinsic risk of infection (1). There is minimal active transport of maternal IgG antibodies across the placenta before 32 weeks of gestation, neutrophils have defective chemotaxis or phagocytosis, and the classic and alternative complement pathways have decreased activity. Attempts to improve the neonate’s immune function have included exchange transfusion (37), white blood cell transfusion (38), administration of intravenous immune globulin (IVIG) therapeutically (39) or prophylactically (40,41), and administration of recombinant human granulocyte colony-stimulating factor (G-CSF) (42). Although these studies have been instructive, they have not demonstrated efficacy in adequately controlled trials, and no recommendations for routine use of these products have been made. In addition to providing enhanced opsonophagocytic activity, IVIG infusions are associated with a prompt release of neutrophils from the marrow neutrophil storage pool into the peripheral circulation and enhanced chemotaxis of neutrophils to the site of bacterial infection (39). Antibody replacement could be more effective by using products containing high titers of antibody against the specific infecting agent, but such products are not yet available for routine use (43). However, a significant protective effect has not been demonstrated in trials of two different preparations of intravenous S. aureus immune globulin (44,45).
TABLE 26.2 Risk Factors for Healthcare-Associated Infections in Neonates
Intrinsic (host)
Decreased function of the immune system
Decreased protection from natural barriers (e.g., skin)
Developing endogenous microflora
Gestational age
Severity of illness
Underlying disease processes (e.g., congenital organ system abnormalities, chronic lung disease, gastrointestinal tract pathology)
Extrinsic
Use of devices
Fetal scalp electrodes
Umbilical, arterial, central venous catheters
Mechanical ventilators
Extracorporeal membrane oxygenation
Ventriculoperitoneal shunts
Fluids
Total parenteral nutrition, intralipids
Transfused blood products
Respiratory care
Breast milk
Treatments
Intravenous steroid therapy
Use of H2 blockers/proton pump inhibitors
Environment
Acquisition of hospital flora
Overcrowding, understaffing
Contaminated equipment, fluids
Traffic from other sections of hospital
Radiology Laboratory
Subspecialty consultants
Neonates are particularly vulnerable to colonization with virulent and/or antimicrobial-resistant bacteria because their mucosal surfaces do not have the usual protective microflora of older infants and adults (46). Immature, fragile skin of the VLBW neonate possibly does not serve as an adequate protective barrier against pathogens that colonize the skin and have the capacity to cause invasive disease (33,47).
EXTRINSIC RISK FACTORS
Many of the extrinsic HAI risk factors in the NICU are device-or environmentally related, as is observed in adult ICUs. Extrinsic risk factors can be categorized as (a) medical devices and equipment, (b) breast milk and formula, (c) medical treatments, (d) behavioral interventions, and (e) administrative and structural.
Medical Devices and Equipment
CVCs, including peripherally inserted central catheters (PICC), are associated with increased risk of BSI caused by bacteria or fungi (9,48,49,50,51,52). In fact, an increased risk of candidemia has been associated with each day of catheter use (52). Various medical devices used for respiratory support (e.g., ventilators and noninvasive ventilatory devices including CPAP, ECMO, and Vapotherm 2000iTM [Vapotherm Inc., Stevensville, MD] oxygen delivery device) are associated with increased risk of infection (53,54). The need by neonates with respiratory distress for increased humidification provides direct exposure of the respiratory mucosa to water that could be contaminated; therefore, the use of sterile water in such situations is recommended (55). For example, intrinsic contamination of the VapothermTM device with Ralstonia sp. during the manufacturing process that could not be eradicated with various disinfection procedures led to clinical infections and the withdrawal of this product from the market (56).
Breast Milk and Formula
Despite the many benefits of breast-feeding, breast milk is a biologic product that has the potential to transmit infection. For example, breast milk from a mother who was infected with GBS or S. aureus has been implicated as the vehicle of transmission of these pathogens to infants with resulting severe sepsis (57,58,59). Neonatal sepsis caused by Klebsiella pneumoniae has been associated with contaminated breast milk resulting from the contamination of a component of a breast pump (60), and contamination of a milk bank pasteurizer was associated with an NICU outbreak of Pseudomonas aeruginosa infections (61). Furthermore, viral agents that could be transmitted to infants in breast milk or in the blood contact associated with breast-feeding from dry, cracked nipples include hepatitis B virus (HBV), HIV, and human T-lymphotrophic virus type 1 (HTLV-1). Therefore, in countries where safe formula for bottle-feeding is readily available, breast-feeding is contraindicated for mothers known to be infected with HIV and HTLV-1. HBV vaccine given to neonates is protective against transmission by breast-feeding. Although cytomegalovirus (CMV) is transmitted in breast milk, maternal antibody is protective against clinically significant disease. The CDC’s guidelines developed for banking human milk obtained from unrelated donors include screening all donors for HIV, HTLV-1, and HBV surface antigen and pasteurization (62.5°C for 30 minutes) of all milk specimens. Bacterial counts of 104 colony-forming units (cfu)/mL or more of nonpathogenic organisms or the presence of gram-negative bacteria (GNB), S. aureus, or α- or β-hemolytic streptococci preclude the use of that milk (62). Established guidelines for human breast milk banks (www.hmbana.org), personal hygiene, and handling and decontaminating the components of breast milk pumps (62) should be followed.
Every healthcare facility that handles expressed breast milk should have a written policy to guide storage and handling. Expressed breast milk should be labeled as soon as it is pumped with at least two identifiers in addition to the date and time, and a dedicated refrigerator/freezer should be used for storage. The American Academy of Pediatrics (AAP) recommends refrigerating milk that will not be used immediately and freezing milk at 0°F or below if it will not be used within 24 hours; previously frozen milk that has been thawed in the refrigerator must be used within 24 hours or discarded (http://www.healthychildren.org/English/ages-stages/baby/breastfeeding/Pages/Storing-and-Preparing-Expressed-Breast-Milk.aspx). Powdered infant formulas are not sterile and pose a risk of infection with organisms such as Cronobacter sakazakii or Salmonella sp. if not handled correctly. The World Health Organization has established guidelines for safe preparation, storage, and handling of powdered infant formulas (http://www.who.int/foodsafety/publications/micro/pif_guidelines.pdf). The key points include hand hygiene and cleaning and sterilizing the feeding-preparation equipment before use, discarding unused refrigerated formula after 24 hours, and using room temperature hang times of preferably no >2 hours for continuous or bolus feeds. The CDC recommends a hang time of not >4 hours for continuous feeds in the NICU (63). The most controversial recommendation made by WHO is to use water >70°C to reconstitute powdered infant formula. This recommendation is supported by laboratory studies demonstrating that higher water temperatures result in greater inactivation of C. sakazakii (64). No clinical data have been published to evaluate the comparative efficacy of different preparation methods. Other stakeholders, including the European Society for Pediatric Gastroenterology, Hepatology, and Nutrition, have argued that such high temperatures adversely affect the vitamins in the formula and therefore cannot be recommended (65). Some have expressed concern about the potential for burns if boiling water is used (66). The AAP recommendations for formula preparation at home call for room temperature water to be added to formula immediately before feeding, as long as a safe water source is available (http://www.healthychildren.org/English/ages-stages/baby/feeding-nutrition/Pages/Sterilizing-and-Warming-Bottles.aspx). This difference from the WHO recommendations likely reflects both the higher risk for invasive infections from C. sakazakii among preterm infants and the practicality of formula preparation for healthy infants in the home.
Medical Treatments
The use of steroids for the treatment of chronic bronchopulmonary dysplasia has been associated with an increased risk of infection (67,68,69). The finding of an increase in the incidence of disseminated Candida spp. infections associated with the unique practice of single-dose steroid administration in infants with prolonged hypotension shortly after birth further supports the role of steroids as an independent risk factor (68). The risk-benefit ratio must be carefully considered before initiating a course of steroids in neonates. The use of H2 blocker/proton pump inhibitor therapy has been associated with an increased incidence of necrotizing enterocolitis (NEC) (70), with sepsis associated with GNB in VLBW infants (50), and with candidemia (71). An increased risk of invasive disease caused by extended-spectrum beta-lactamase (ESBL)-producing Klebsiella spp. (51) or Candida spp. (72) has been associated with the use of third-generation cephalosporins. Finally, topical petrolatum applied to the skin for improved moisturizing effect was associated with an increased risk of fungal infections (46).
Behavioral Interventions
There are theoretical concerns that infection risk can increase in association with the innovative practices of cobedding (73) and kangaroo care (74) used in the NICU to improve developmental outcomes as a result of increased opportunity for skinto-skin exposure of multiple-gestation infants to each other and to their mothers, respectively. Kangaroo care was an independent risk factor for MRSA infection in one study (75). Although toys in NICU beds have been found to be contaminated with pathogenic bacteria (76), their role in transmission of infection has not been established.
Administrative and Structural Issues
Studies of outbreaks in the newborn nursery and NICUs were some of the first to demonstrate the relationship between rates of late-onset infection and overcrowding and understaffing (25,77,78,79,80,81). One study that evaluated staffing levels of registered nurses specifically found a significant reduction in the BSI risk when registered nurse staffing hours were increased in one NICU (81). In a large cohort study of 558 NICUs, VLBW infants born in hospitals that received recognition for nursing excellence (RNE) had a significantly lower rate of positive blood or cerebrospinal fluid (CSF) cultures >3 days after birth compared with infants born in non-RNE hospitals (82). NICUs with all single-patient rooms have several advantages, including improving the neurodevelopmental effects of lighting and sound, facilitating family-centered care, breast-feeding, kangaroo care, and isolation precautions when needed, and potentially reducing HAI rates (83,84). Although data are not yet sufficient to support an evidence-based recommendation for single-patient rooms in NICUs, the most recent publication of recommended standards for NICU design and of experience suggests that this design will become more prevalent in the future. Finally, exposure to construction dust or to spores during transport could result in cutaneous or invasive aspergillosis in the neonate (85); thus, dust containment and air filtration during construction, renovation, and any disruption of the integrity of the environment (86) are especially important for the NICU because the VLBW infant is at increased risk of developing disease after exposure.
SITES OF INFECTION
The sites of HAIs in neonates differ from those in adults (48). Primary BSIs account for 30% to 50% of episodes in neonates, depending on birth weight, and surgical site infections (SSIs) and UTIs are rare. In contrast, the rates of catheter-associated UTIs and SSIs are higher in adult patients (87). Cutaneous sites are more likely to be involved in neonates. Clinical manifestations of methicillin-susceptible S. aureus (MSSA) and methicillin-resistant S. aureus (MRSA) in otherwise healthy, term neonates (88) or in those in the NICU (89) in the current era have been reviewed. Pustules, bullous impetigo, subcutaneous abscesses, scalded skin syndrome, and toxic shock syndrome associated with either MSSA or MRSA can be seen in outbreaks in term nurseries (often presenting after discharge) or NICUs. Omphalitis is rare (0.7%) in developed countries where deliveries are performed aseptically and cord care to prevent infection is performed routinely. However, the occurrence of omphalitis can involve serious complications including sepsis, superficial or deep abscesses, necrotizing fasciitis, peritonitis, and hepatic vein thrombosis (90). Congenital mucocutaneous candidiasis in term infants is generally not associated with invasive disease, whereas fungal dermatitis caused by Candida albicans is considered a manifestation of systemic disease when it occurs during the second week of life in ELBW infants after vaginal delivery, postnatal administration of steroids, or hyperglycemia (91). Gastroenteritis and colitis also can occur following exposure to viruses and/or bacteria circulating in the community. Osteomyelitis/septic arthritis and conjunctivitis are other less common manifestations. Meningitis and brain abscess also can occur in neonates.
Pulmonary infections result from exposure to respiratory viruses circulating in the community, and/or complications of respiratory support in the NICU. VAP, which has always been an important HAI among adults and older children, is notoriously difficult to diagnose in neonates (particularly preterm infants) because several components of the traditional surveillance definition, including abnormal gas exchange and radiographic infiltrates, can occur in infants with hyaline membrane disease or underlying cardiac or pulmonary disorders that are common in neonates (33). For this reason, interfacility comparison of VAP rates is plagued by ascertainment bias for infants in the NICU. At the time of this writing, the CDC is developing a new surveillance definition for ventilator-associated events, which will encompass both pneumonia and noninfectious complications and will be based on more objective criteria (http://www.cdc.gov/nhsn/PDFs/vae/CDC_VAE_CommunicationsSummaryfor-compliance_20120313.pdf). Currently, these definitions apply to patients >18 years of age. Further research will be necessary to evaluate the performance of any new definition(s) in pediatric patients.
NEC is one of the most common gastrointestinal emergencies among neonates. In fact, >90% of episodes occur in infants who are born preterm, and the NEC risk is inversely related to birth weight and gestational age. Overall, there is about a 7% occurrence among VLBW infants with substantial variation over time and from center to center (92). Factors that contribute to the development of NEC include developmental immaturity of gastrointestinal tract function including circulatory regulation, hypoxic/ischemic injury, abnormal bacterial colonization, and early feeding of formula. The role of specific inflammatory cytokines in the pathogenesis of NEC is under investigation. Sporadic episodes and clusters can occur. Several different bacteria (e.g., Escherichia coli, K. pneumoniae, Enterobacter cloacae, Clostridium sp.) and viruses (e.g., rotavirus, coronavirus, enterovirus) have been associated with NEC in some reports of clusters (93). Outbreaks can be controlled by implementing infection control measures, including hand hygiene, contact precautions, cohorting of infants and staff, and restriction of HCWs with signs of gastrointestinal tract illness from duty until resolved (93).
A new NHSN surveillance definition for NEC was introduced in 2012 (18). The manifestations include clinical signs such as bilious aspirates, vomiting, abdominal distension, or occult or gross blood in stool; radiographic evidence includes findings such as pneumatosis intestinalis, portal venous gas, or pneumoperitoneum. NEC-associated mortality rates vary from 15% to 30%. When intestinal necrosis occurs, resection is necessary, often leaving the infant with short bowel syndrome and dependence on parenteral nutrition.
ETIOLOGY, CLINICAL MANIFESTATIONS, AND EPIDEMIOLOGY
TRENDS IN NURSERY AND NICU INFECTIONS
Infections acquired in normal newborn nurseries are most frequently not invasive, usually involve the skin or mucous membranes, and result from HCW hand carriage, contaminated equipment, and medications. Impetigo, conjunctivitis (94), omphalitis, and soft tissue abscess are the most frequently observed clinical manifestations. S. aureus remains the most frequently isolated pathogen from such infants, with MRSA causing infection more often than MSSA in communities with high prevalence of community-associated MRSA (CA-MRSA) infections (88). Outbreaks of group A streptococcal infection (16,95) and of diarrhea caused by bacterial pathogens (e.g., Salmonella spp. or Shigella spp.) could occur in both term and preterm nurseries (15,96,97) but have been reported less frequently in recent years. CONS rarely cause early-onset disease in otherwise healthy, term neonates without any devices in place.
HCWs are rarely the source of outbreaks caused by bacteria and fungi, especially MRSA, but when they are, factors are usually present to increase the transmission of infectious agents to others (e.g., sinusitis, draining otitis externa, chronic otitis, respiratory tract infections, dermatitis, onychomycosis, or artificial nails) (98,99,100,101,102,103,104). An HCW colonized with an epidemic strain of S. aureus rarely has been identified; when it has, the outbreak has been controlled by removing that individual from direct patient care (105). Individuals wearing artificial nails who have direct patient contact have been implicated in outbreaks of P. aeruginosa (102,103) and ESBL-producing K. pneumoniae (104) in NICUs, where molecular typing demonstrated that both HCW and patient isolates were indistinguishable. These studies contributed substantially to the recommendation not to wear artificial nails or extenders when having direct contact with high-risk patients.
Unexplained shifts in the predominant etiology of bacterial infections in high-risk infants have been observed over time (106,107). Invasive strains of S. aureus were predominant in the 1950s. For unexplained reasons, GNB, especially P. aeruginosa, Klebsiella spp., and E. coli strains prevailed in the 1960s but were replaced by GBS in the 1970s. GBS remained as the major pathogen of early-onset disease throughout the 1980s and 1990s but also manifested as late-onset disease, most frequently meningitis, less commonly as osteomyelitis/septic arthritis, and rarely (108) as horizontal transmission within the NICU. However, in the 1980s, MRSA and CONS emerged as prevailing HAI pathogens in the NICU. Although CONS continued to account for 40% to 50% of late-onset infections in most NICUs in the 1990s, one NICU reported a shift to predominant GNB, especially ceftazidime-resistant Enterobacter spp., as the pathogen from 1996 to 2001 (109), and another reported an increase in the number of commensals (107), similar to the experience of the National Institute of Child Health and Human Development Neonatal Research Network (3). In 1999, the Pediatric Prevention Network conducted a cross-sectional study to assess the prevalence of HAI in US NICUs; CONS accounted for 31.6% of infections, followed by enterococci (10.3%) and E. coli (8.5%) (48). The following three pathogens associated with <15% to 20% of NICU infections are particularly problematic because of the difficulty in treatment: (a) enterococci, especially vancomycin-resistant enterococcus (VRE), (b) multidrug-resistant GNB, especially Enterobacter spp. and ESBL-producing Klebsiella spp., and (c) fungi, predominantly Candida spp., especially non-albicans species.
GROUP BSTREPTOCOCCUS
From the late 1970s through the mid-1990s, GBS was the most frequently isolated pathogen from term infants with early-onset disease, accounting for approximately 70% of episodes (3). This pathogen was acquired from the mother in the peripartum period; in approximately 70% of infants <2,000 g at birth, GBS infections were acquired in utero with positive blood cultures obtained at birth. However, following the development and implementation of the evidence-based recommendations published collaboratively by the CDC, the American College of Obstetrics and Gynecology (ACOG), and the AAP for the administration of chemoprophylaxis at the onset of labor to colonized women, those delivering prematurely, and those who have other risk factors that were published in 1996, there was a 65% reduction in the incidence of early-onset GBS disease from 1993 to 1998 and a plateau in 1999-2001 (110). The guidelines were updated in 2002 to include a recommendation to screen all pregnant women at 35 to 37 weeks gestation based on a population-based study that demonstrated a greater reduction in disease associated with a culture-based strategy compared with a risk-based strategy (111). This change resulted in a further reduction in 2003 to 2004 to a rate of 0.34 per 1,000 live births reported by the CDC’s active bacterial core surveillance (ABCs) network and a narrowing of the racial disparity in the rates of disease (112). These data represented an 80% reduction from a rate in 1,000 live births of 1.7 in 1993 to 0.34 in 2004. A persistent reduction in early-onset GBS disease has also been reported in the VLBW infants in the National Institute of Child Health and Human Development Neonatal Research Network (113) and by other groups who have been tracking the rates of disease. In 2010, the guidelines were once again updated to include revised algorithms for screening and prophylaxis of pregnant women as well as management of newborns with risk factors for early-onset GBS disease (114). Following the publication of the GBS chemoprophylaxis guidelines, the rates of ampicillin-resistant E. coli as a cause of early-onset sepsis in VLBW infants have increased, but no association between intrapartum antibiotic exposure and overall or ampicillin-resistant E. coli sepsis has been found (113,115). Importantly, intrapartum chemoprophylaxis has not been shown to reduce the rates of late-onset GBS disease (116), which likely represents the acquisition of the organism postnatally, including potentially from sources within the nursery or NICU (117).
Coagulase-Negative Staphylococci
CONS account for nearly 50% of late-onset HAIs in many reports (3,9,40,41,48,118). Several reasons for the increased recognition of this organism as a neonatal pathogen follow:
Increased number and survival of VLBW infants.
Increased use of intravascular devices in the high-risk neonate.
Increased likelihood of identifying a blood culture positive for CONS as a true bacteremia with the use of more consistent definitions and methods of obtaining blood cultures (e.g., two blood cultures, preferably one from a CVC and one from a peripheral site).
The epidemiology of neonatal CONS-BSI has been studied extensively using pulsed-field gel electrophoresis (PFGE), ribotyping, DNA-DNA hybridization, and restriction endonuclease analysis in addition to the traditional methods of speciation, phage typing, and plasmid analysis. PFGE is the most reliable method for confirming the identity of strains. Distinct clones of both Staphylococcus haemolyticus (119,120) and Staphylococcus epidermidis (121,122,123) can become endemic in NICUs, and cause clusters of infections over periods of 6 months to as long as 10 years. At the same time, many completely unrelated strains can be isolated from infants within the same unit. Some NICUs possibly have no related strains identified during a specific period of time (124,125). Eastick et al. (126) have reported relatively stable reservoirs of CONS in the feces, around the ear, and in the axillae and nares but small, unstable numbers on the skin of the forearm and leg. Thus, cross-contamination among sites on the same infant as well as horizontal spread among infants is an important mode of transmission. Infusion of parenteral fluids contaminated with CONS is a rare source of BSI in the NICU (127).
The clinical manifestations of CONS-BSI are most often nonspecific, and this pathogen is rarely considered a cause of death (128). The signs of sepsis observed most frequently are fever, apnea and bradycardia, feeding intolerance, and lethargy. Temperature instability, thrombocytopenia, abdominal distention, and persistent BSI in the absence of a CVC have been associated with disease caused by CONS (129,130). Specific delta toxin-producing strains have been found in pure culture in the stool or in the blood or peritoneal fluid of patients with a mild form of NEC (131,132). Focal infections associated with these pathogens include neck abscess, omphalitis, wound abscess, and mastitis (133). Right-sided endocarditis caused by CONS must be considered in the presence of a CVC, persistent BSI (>48 hours), and thrombocytopenia during appropriate antimicrobial therapy for BSI (134). Physical examination might reveal no other abnormalities but an echocardiogram could demonstrate vegetations in the right atrium or on the tricuspid valve. Removal of the CVC is required for clearance of CONS if BSI persists for >4 days (135).
Staphylococcus aureus
After CONS, S. aureus was the second most frequently isolated pathogen from NICU infants in a 1986 to 1993 report (9) and in studies from the Neonatal Research Network (3). In contrast, the point-prevalence study of 29 NICUs performed in 1999 reported that S. aureus accounted for only 3.4% of BSIs (48). Since the late 1980s, S. aureus outbreaks in the NICU have been associated with both MSSA (78,105,136,137,138,139) and MRSA (25,140,141,142,143,144), and reports of outbreaks of MRSA have surpassed those of MSSA in recent years. The incidence of late-onset MRSA infections increased >300% between 1995 and 2004 (145). Nurseries situated in large general hospitals that share services (laboratory, radiology) and HCWs (nurses, respiratory therapists, consulting physicians) are especially vulnerable to the acquisition of virulent strains from geographically distant foci of healthcare-associated MSSA or MRSA infection. A single or multiple virulent strains can be introduced into the nursery by a colonized infant, a visiting family member, and, rarely, an HCW (146,147,148). However, the principal mode of transmission is horizontal via the hands of HCWs who fail to follow recommendations for hand hygiene between patient contacts. PFGE is the most useful method to determine whether a single or multiple strains caused an outbreak (149); a recent study demonstrated the improved efficacy of detecting clonal strains through the use of whole-genome sequencing, although this technique currently remains primarily a research tool (150). High rates of colonization (30% to 70%) can become established before clinical disease is recognized. The clinical and economic impacts of MRSA colonization and infection in NICUs have been quantified in several studies (151,152). Environmental sources or chronic carriers have rarely been implicated in nosocomial transmission in the NICU, but environmental contamination with S. aureus does occur and contributes to the overall burden of pathogens in high-risk units. Unidentified virulence factors and environmental conditions determine the persistence of the organism in the NICU. In Parkland Health and Hospital System’s crowded NICU in Dallas, Texas, MRSA persisted for a 3-year period from 1988 to 1991 (25). Neither susceptible S. aureus nor MRSA nursery outbreaks were controlled until conditions of overcrowding and understaffing were corrected (25,78). Minimizing the number of nurses caring for both MRSA-colonized and -uncolonized infants may be beneficial in reducing MRSA transmission (153). The prevalence of CA-MRSA strains that have antibiotic susceptibility and molecular profiles (staphylococcal chromosomal cassette [SCC] mec types IV or V) distinct from those of the traditional healthcare-associated MRSA strains (149) has increased, and transmission of those CA-MRSA strains have been reported within healthcare facilities (154,155,156). A shift from healthcare-associated MRSA to CA-MRSA in the NICU now appears to be occurring (157
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