Childhood Cancer and Heredity



Childhood Cancer and Heredity


Sharon E. Plon

David Malkin



Questions often arise in the minds of parents when a child is first diagnosed with cancer: “Did this happen because of something I did or passed on to my child?” and “What are the chances that my other children will develop cancer?” In this chapter, we outline the scientific and clinical evidence that is available to answer these questions with regard to genetic susceptibility. With the implementation of massively parallel sequencing technologies,1 there has been an acceleration of research to identify genes that are mutated in cancer susceptibility syndromes, thus providing more extensive opportunities for genetic testing. Although many of the chapters in this book will focus on specific tumor types, we focus here on the variety of genetic mechanisms that can result in genetic susceptibility to childhood cancer. After reviewing this information, we discuss the special issues to be considered in genetic testing for cancer susceptibility for the pediatric patient.

Overwhelming evidence demonstrates that cancer is the result of multiple changes in the DNA of the tumor cell including point mutations, larger scale copy number changes, and silencing of genes by epigenetic changes. The majority of these alterations occur in the cells that become the tumor (somatic mutation) and are not inherited. These alterations are discussed in Chapter 3 and in the disease-specific chapters. Overall, it is the minority of childhood cancers that are caused by a clearly inherited predisposition. However, the percentage varies significantly with individual tumor types and is a composite of several different genetic factors with adrenocortical carcinoma, choroid plexus carcinoma (CPC), optic glioma and retinoblastoma having 50% or higher, and many other tumor types including leukemia and neuroblastoma falling in the range of 1% to 10%.2,3 Hereditary cancer in this case implies a genetic alteration that has been passed on to the child from a parent or that was a new constitutional mutation that occurred in the oocyte or sperm before fertilization, referred to as a de novo event. Parents are often surprised to learn that their child has a hereditary predisposition to cancer despite a negative family history of cancer because of a de novo mutation in a cancer predisposing gene such as RB1. With the use of whole-genome or -exome sequencing methods, there are beginning to be estimates of the proportion of childhood cancer patients with a genetic susceptibility mutation based on direct analysis of the entire genetic sequence with an estimate of 9% to 10% from one early study.4








TABLE 2.1 Multiple Different Genetic Disorders Are Associated with an Increased Risk of Developing Wilms Tumor



































Syndrome


Location—Gene


Molecular Basis


WAGR


11p13—WT1


Cytogenetically visible deletion


Dennys-Drash


11p13—WT1


Missense and loss of function mutation (often de novo)


Familial Wilms tumor


11p15—CTR9


14q32—DICER1


Loss of function mutations (often inherited)


Beckwith-Weideman syndrome


11p15—multiple genes including IGF2, H19, and CDKN1C


Loss of imprinting, paternal duplication, point mutation (rarely inherited)


Fanconi anemia D1


13q12—BRCA2


Autosomal recessive with BRCA2 mutations inherited from both parents


Perlman syndrome


2q37—DIS3L2


Autosomal recessive with DIS3L2 mutations inherited from both parents


Trisomy 18


Trisomy 18—gene unknown


De novo chromosome gain


Geneticists categorize disorders by the molecular mechanism underlying the cancer susceptibility including chromosomal abnormality; Mendelian autosomal dominant, recessive, or X-linked patterns; and non-Mendelian inheritance including polygenic, mitochondrial, and imprinting disorders. For any given tumor type, the overall inherited fraction may be the sum of several different genetic mechanisms. The hereditary risk for Wilms tumor (WT), the most common solid tumor of the kidney, derives from a compilation of diverse genetic disorders with fundamentally distinct molecular mechanisms (Table 2.1).5 In the following sections, we describe the major types and provide examples of hereditary disorders that result in genetic susceptibility to childhood cancers.


CONSTITUTIONAL CHROMOSOMAL ABNORMALITIES

Children with constitutional chromosomal abnormalities (abnormal number [i.e., aneuploidy] or structural rearrangements) present with defined clinical phenotypes that can include dysmorphic features, congenital abnormalities, growth failure, and developmental delay. Most chromosome abnormalities result from errors that occurred during male or female meiosis, with both parents having a normal chromosomal count of 22 pairs of autosomes and the sex chromosome pair. Rarely, these disorders can result when a parent is a carrier for a balanced translocation who has offspring with an unbalanced karyotype. Due to the characteristic physical features of children with chromosomal abnormalities, the increased association of specific chromosome disorders with malignancy risk was recognized early. For example, although there is
high mortality from the congenital anomalies associated with trisomy 18, it has become apparent from the number of case reports that the rare long-term survivor of this disorder has a significantly increased risk of developing WT (both unilateral and bilateral) in childhood.6


Down Syndrome

One of the most striking predispositions to cancer caused by a constitutional chromosome abnormality is the nearly 20-fold increased risk of leukemia in children who have trisomy 21 (reviewed by Rabin and Whitlock7). Trisomy 21 is also a common finding in the karyotype of leukemia cells from patients without Down syndrome (DS). Thus, presence of an extra chromosome 21 appears to be leukemogenic and may be acquired in the germline or somatically.

In children with DS, the ratio of leukemia subtypes is shifted to 60% lymphoid and 40% myeloid from the ratio in the general population of 80% lymphoid and 20% myeloid.7 This shift is principally due to the increased incidence of myeloid leukemias in children younger than 2 years of age. Approximately 30% of DS children with AML develop acute megakaryocytic leukemia representing a 400-fold excess (AMKL or M7) and the cytogenetic abnormalities within the tumor also differ as DS-AMKL is not associated with the characteristic t(1;22)(p13;q13) translocation seen in other AMKL patients.

In infancy, children with DS can develop transient myeloid proliferative syndrome that can appear similar to leukemia but that is self-limited.8 However, 25% of DS children with this syndrome eventually develop frank AML. Similarly, children with DS have a higher rate of myelodysplasia syndromes (MDS), which are characterized by thrombocytopenia, abnormal megakaryocytopoiesis, and an abnormal karyotype, most commonly trisomy 8.7

A recurring finding in DS-associated leukemia is that the pattern of somatic mutation found in the leukemia cells is distinct from that seen in the general population. For example, somatic mutations in the GATA1 gene are frequently detected in both TMD and AMKL samples from DS patients suggesting that it is an early event, probably occurring in utero8,9 GATA1 encodes a transcription factor that is essential for maturation of erythroid cells and megakaryocytes.

Children with DS are also at increased risk to develop ALL. An international review of the therapeutic outcome for children with DS-ALL was compiled from 16 different international treatment trials (1995 to 2004).10 This retrospective analysis demonstrated that relapse was more common in DS-ALL patients despite the absence of other cytogenetics finding and the main contributor to increased mortality (74% ± 2% vs. 89% ± 1%, p < 0.0001) at 8 years for DS-ALL versus non-DS-ALL, respectively. There was also increased risk of infection in DS-ALL patients with both high- and low-risk forms of leukemia, suggesting the need for altered management of these fragile patients. As described in the chapter on ALL, the somatic alterations in DS-ALL are also distinct from those seen in children without DS who develop leukemia.

Despite the well-documented increase in the risk of leukemia in children with DS, a study based on exhaustive analysis of the Danish population found no increased risk of solid tumors in children or adults with DS including significantly fewer cases of breast cancer compared with an age-matched population.11


Sex Chromosome Abnormalities

Sex chromosome abnormalities comprise a large group of disorders that result from numerical and structural problems with the X and Y chromosomes. The overall incidence of sex chromosome abnormalities is high, with 47XXY and Turner syndrome (45X) each affecting approximately 1 in 2,000 individuals. Due to the lack of congenital anomalies, the diagnosis of these disorders, unlike DS, is often not made until late adolescence or young adulthood, when problems with the transition through puberty and fertility become apparent. However, children with these disorders are at increased risk for certain malignancies during childhood, arguing for earlier diagnosis. The large-scale implementation in the United States of noninvasive prenatal genetic testing methods that are sensitive to sex chromosome aneuploidy will likely significantly increase the early diagnosis of these syndromes.12


Y Chromosome

Any phenotypic female with part or all of a Y chromosome is at risk for development of gonadoblastoma including girls with androgen-resistance syndromes (i.e., testicular feminization) who have a 46XY karyotype, children with gonadal dysgenesis, and girls with Turner syndrome and a mosaic 45X, 46XY karyotype. Studies suggest that the gonadoblastoma and/or dysgerminomas risk can be as high as 25% for individuals diagnosed in the late second or third decade.13 A prospective study from Japan of children undergoing gonadectomy of streak gonads revealed pathologic evidence of gonadoblastoma and/or germinoma in 6 of 11 patients as early as 2 years of age.14 For sex chromosomes, mosaicism is presumably due to a 46XY zygote losing a Y chromosome in an early mitotic division during development resulting in a mixture of cells that are either 46XY or 45X. Approximately 25% of girls with Turner syndrome have some evidence for mosaicism of the Y chromosome with the TSPY gene implicated as the gene responsible for gonadoblastoma in these conditions.15

Phenotypic girls with a Y chromosome component should have prophylactic surgery to remove their gonads (reviewed by Canto13). In most circumstances, these gonads are nonfunctional, and removal does not affect the girls medically. However, the discovery of a sex chromosome karyotype that is not consistent with their phenotypic sex can be devastating for patients and their parents and should be carefully handled by a medical team familiar with these disorders and psychosocial aspects of sex assignment.16


47 XXY

The clinical phenotype of boys with a 47XXY karyotype (Klinefelter syndrome) is variable and includes tall stature, infertility, decreased secondary sex characteristics, and gynecomastia. Men with 47XXY are often not diagnosed until adulthood, making epidemiologic studies of the increased risk of malignancy in childhood difficult. A review of the literature demonstrated a 50-fold increased risk of extra gonadal germ cell tumors.17,18 Large population-based studies in European populations demonstrate an increased risk of developing mediastinal germ cell tumors and increased standardized mortality risk (SMR) particularly for breast cancer, SMR 57.8 (18.8 to 135.0) and non-Hodgkin lymphoma 3.5 (1.6 to 6.6).


STRUCTURAL CHROMOSOMAL ABNORMALITIES


Detection and Impact

As cytogenetic techniques were improved in the 1970s, it became clear that many of the complex dysmorphic syndromes were the result of large cytogenetically visible deletions. During the next two decades, detection of deletions by Southern blot analysis and fluorescent in situ hybridization (FISH) permitted further progress in identifying the underlying cause of these syndromes. Starting around the beginning of the new century, array comparative genomic hybridization (arrayCGH), became the major technology used to detect copy number changes in tumor and constitutional DNA for both research and clinical applications.19,20,21 ArrayCGH in current use allows the entire genome to be sampled for deletions or amplification in one experiment by using comparative hybridization of fluorescently labeled DNA from patient samples onto chips containing gridded arrays of oligonucleotides representing
the human genome. Some arrayCGH methods may be sensitive to copy number as well as the sequence (or genotype) of the patient at each point detected on the array. ArrayCGH is frequently employed as the frontline genetic test when faced with a child with multiple congenital anomalies or a child with cancer and either a congenital anomaly or intellectual disability.21 Whole-genome sequencing can also be used to detect copy number changes with breakpoint resolution22 although it is not yet being actively employed in the clinical arena. Conversely, it is important to remember that many sequence-based methods including Sanger sequencing and whole-exome sequencing, which attempts to read the open reading frame of every gene, are generally not able to detect deletions or duplications larger than 20 to 30 basepairs.

Children may present a complex phenotype when a chromosomal deletion large enough to remove multiple genes is present. Variation in the clinical phenotype may result from the size and number of contiguous genes that are missing. Deletion syndromes overlap with autosomal dominant disorders that are the result of smaller mutations affecting a single gene within the deleted segment. For example, retinoblastoma, can be transmitted as result of an autosomal dominant disorder due to single base changes in the RB1 gene or associated with a cytogenetically visible deletion of 13q14 in a small percentage of cases.23


WAGR: Wilms Tumor, Aniridia, Genital Abnormalities, and Mental Retardation

A small proportion of patients with WT may exhibit a spectrum of congenital abnormalities that result from a specific deletion of chromosome 11p13. The WAGR syndrome is named for the components of the disorder: WT, aniridia, genital abnormalities, including hypospadias, and the R referred to mental retardation, now reported as intellectual disability, as well as evidence of autistic features associated with cytogenetically detectable deletions at 11p13.24 The PAX6 gene is contained within the deletion found in WAGR patients and is responsible for the aniridia phenotype. Surveys of children with WT in France revealed that 2% demonstrated WAGR.25

WT1, the gene at 11p13 responsible for the WT phenotype encodes a zinc finger transcription factor (reviewed by Al-Hussain26). All or part of WT1 is deleted in children with WAGR and WT. In contrast, constitutional point mutations in WT1 including missense mutations are found in children with the Denys-Drash syndrome, a disorder characterized by severe urogenital abnormalities and WT. This is an example where total loss of a gene product through gene deletion results in a less severe disease than production of a mutant protein due to a missense mutation. It is hypothesized that the mutant protein may have a dominant negative impact on genital development which may not occur when the WT1 gene is deleted.

ArrayCGH is performed for infants with aniridia to determine whether the deletion includes the WT1 gene in order to assess the risk of developing WT and need for surveillance. Screening for the development of WT in children with WAGR or Denys-Drash syndrome is often carried out by abdominal ultrasound examinations every 4 months until the age of 5 years, with decreasing frequency of examinations at later ages in order to decrease the stage of WT at diagnosis (see Table 2.2).27

Screening for WT is further discussed in the section on management of patients with Beckwith-Weidemann syndrome. In addition to surveillance methods, parents should be counseled to bring the child in for evaluation if they suspect any change in abdominal girth or feel a mass, regardless of whether ultrasound screening is performed as interval tumors can develop. A long-term analysis of children with WT and either Denys-Drash or WAGR found a 62% and 38% rate of renal failure, respectively, 20 years after the diagnosis of WT.28 Therefore, in addition to tumor surveillance, children with constitutional mutations in the WT1 gene require long-term follow-up for evidence of declining renal function.


OVERGROWTH DISORDERS AND IMPRINTING ERRORS


Beckwith-Wiedemann Syndrome

The relationship between disorders of increased growth and predisposition to cancer are evident in Beckwith-Wiedemann syndrome (BWS) and hemihyperplasia (HH, previously termed hemihypertrophy) linked to a significantly increased risk of developing abdominal tumors, including WT and hepatoblastoma.29 BWS is characterized by excessive intrauterine and postnatal growth, organomegaly, hypoglycemia at birth, macroglossia, and unusual linear ear creases and pitting. HH is defined as asymmetric growth due to overgrowth of one side relative to the other. It can be limited to a limb or the face, or can include the whole side. HH can be a feature of BWS or an isolated finding. Of 183 children in the BWS Registry, 13 had developed a tumor by age 4.30 For children with isolated HH, the risk of WT is approximately 3%. Children with both BWS and HH had a higher risk of WT, than children with either condition alone. Nephromegaly seen on imaging is also a risk factor for WT.

The genetic basis of BWS and HH is complex.29 Cytogenetically normal children with BWS may inherit two copies of a paternal chromosome 11 and no maternal copy, termed uniparental disomy (UPD). Alternatively molecularly visible rearrangements that result in paternal duplications of 11p15 are also seen. These unusual genetic alterations result from imprinting, which refers to the differential expression of genes, depending on whether they were inherited on the maternal or paternal chromosome. There are also families who have an apparent autosomal dominant pattern of inheritance mapping to 11p15. In these families, features of BWS are more likely to be seen in children who inherit the mutation from their mother.

Imprinted genes implicated in the etiology of BWS include the paternally expressed (maternally imprinted) genes insulin-like growth factor 2 gene (IGF2) and RNA transcript, KCNQ1OT1(LIT1) and the maternally expressed (paternally imprinted) genes H19 and CDKN1C.31 Among BWS patients, 25% to 50% have loss of imprinting (biallelic expression) of IGF2; 50% have an epigenetic mutation that results in loss of imprinting of KCNQ1OT1 and 5% carry mutations in the CDKN1C/p57KIP2 gene.29 Molecular testing for alteration in the genes implicated in BWS is performed by both methylation analysis (which detects altered imprints) and mutation analysis. Children who develop embryonal tumors such as rhabdomyosarcoma and hepatoblastoma are more likely to have epigenetic changes in domain 2 whereas WT is more strongly associated with epigenetic alterations in domain 1 or uniparental disomy.29 The results also improve prediction of the likelihood of the parents having another child with BWS. For example, parents of a child with BWS due to uniparental disomy have a very low risk (much less than 1%) of recurrence in another pregnancy.

The risk of having a child with BWS is increased when the pregnancy was initiated by assisted reproductive technologies (ART) including in vitro fertilization (IVF).32 For example, a population-based case:control study from Australia confirmed a 17-fold relative risk of BWS in pregnancies initiated by IVF.33 However, the absolute risk of BWS in an ART-associated pregnancy is still very low at 1 in 4,000 pregnancies.

Given the increased risk of WT and other abdominal malignancy in these conditions, screening by regular serial abdominal ultrasound examinations until age 9 and serial AFP levels until age 4 is recommended for children with BWS, HH, or both.34 Children with BWS who were screened for WT were much less likely to present with advanced disease than those who were not screened (0 of 12 vs. 25 of 59).35 Which health care professional manages cancer screening is quite variable in different centers including the child’s pediatrician, the medical geneticist making the initial syndromic diagnosis or an oncologist with a specific focus on hereditary cancer risk. Table 2.2 summarizes the WT
screening regimens implemented at the Childhood Cancer Prevention and Screening Clinic housed in the Texas Children’s Cancer Center.








TABLE 2.2 Screening Regimens Employed for Children with Genetic Susceptibility to Wilms Tumor at the Texas Children’s Childhood Cancer Prevention and Screening Clinic























Syndrome


Screening Regimen


Beckwith-Wiedemann syndrome


<4 y of age


History and physical exam every 1 y


Assess for Wilms Tumor (including renal dysfunction, mass, hematuria)


Assess for hepatoblastoma (including hepatomegaly)


Abdominal ultrasound and AFP every 3 mo


4-8 y of age


History and physical exam every 1 y


Assess for Wilms Tumor (including renal dysfunction, mass, hematuria)


Renal ultrasound every 3 mo


Isolated hemihypertrophy


Same as for BWS


Simpson-Golabi-Behmel syndrome


Same as for BWS


WAGR syndrome


<9 y of age


History and physical exam every 1 y


Assess for Wilms Tumor (including renal dysfunction, mass, hematuria)


Renal ultrasound every 3 mo


Lifelong


Annual assessment of renal function


Denys-Drash syndrome


<9 y of age


History and physical exam every 1 y


Assess for Wilms Tumor (including renal dysfunction, mass, hematuria)


Renal ultrasound every 3 mo


Lifelong


Annual assessment of renal function


Provided by Surya Rednam, MD, Baylor College of Medicine



Other WT Loci

Overall, bilateral WT or a family history of WT occurs in 1% to 5% of patients. Linkage studies have indicated that the gene for familial WT must be distinct from WT1 and from genes that predispose to BWS. Direct exome sequencing of WT kindreds revealed mutations in the CTR9 gene encoding a protein important for RNA polymerase in 3 of 35 kindreds.36 In addition, some families carrying DICER1 mutations (described below) also demonstrate WT.


Proteus and Other Overgrowth Syndromes

Several conditions are associated with overgrowth with or without an increased cancer risk (reviewed in Ref. 37). As exemplified here, the underlying genetic mechanisms are remarkably variable and include abnormal imprinting, mosaicism for specific activating mutations in proto-oncogenes, deleterious mutations in a dominant condition, and rare recessive mutations.

Proteus syndrome is a multisystem disease of asymmetric, disproportionate overgrowth, dysregulated deposition of adipose tissue forming lipomas, lipohyoplasia and focal fat depositions, a characteristic cerebriform connective tissue nevus commonly present on the soles of the feet, bony abnormalities, and intellectual disability or neurologic findings in some patients.38 Mosaic mutation of the AKT kinase gene (typically the c.49G > A, p. Glu17Lys missense change) found in only a small proportion of the patient’s cells is the causal genetic lesion in patients with Proteus syndrome. Functional AKT disruption leads to cellular growth dysregulation, accounting for the characteristic multisystem overgrowth phenotype. Unlike BWS and other overgrowth syndromes, Proteus syndrome patients do not appear to develop malignant neoplasms, though benign lesions of adipose tissue are extremely common.

Sotos syndrome is characterized by macrocephaly, increased height, developmental delay, and facial dysmorphism.39 Childhood cancers have been reported in children with Sotos syndrome, though no specific types appear to be overrepresented. The disease is caused by de novo mutations of the NSD1 gene (nuclear receptor binding SET domain protein 1) that encodes a ubiquitously expressed protein of the chromatin-modifying enzyme family whose precise function is not well characterized.

Simpson-Golabi-Behmel syndrome is an autosomal recessively inherited disorder characterized by skeletal, cardiac, renal, and craniofacial abnormalities. Generalized overgrowth is observed as well as susceptibility to a wide spectrum of tumors not dissimilar from that seen in BWS, namely, WT, gonadoblastoma, neuroblastoma, and hepatoblastoma. There are two main types of SGB syndrome, each associated with mutations of a particular gene. In SGB type 1, mutations of the glypican 3 gene (GPC3), which is ubiquitously expressed in mesodermal tissues, is observed. In SGB type 2, mutations of the CXORF5 gene, which forms part of the BRCA1/2 complex, have been suggested. The mechanism by which alterations of this gene might lead to the phenotype is not well described. Several other disorders classified as hereditary overgrowth syndromes have been described, but are generally either only very rarely associated with childhood-onset cancers or poorly molecularly characterized.


AUTOSOMAL DOMINANT DISORDERS

Autosomal dominant syndromes comprise the majority of families with single-gene disorders that convey an increased risk of cancer in both childhood and adulthood. The features of autosomal dominant inheritance include equal transmission of a heterozygous mutation from the father or mother to a son or daughter. Often, there is a multigenerational pattern, and a variable expression of the disorder within a family, with “skipped” generations (at the phenotypic level) because of incomplete penetrance. Penetrance
is defined as the probability that a person inheriting the mutation will develop the disease in question. Although autosomal dominant inheritance is described on the basis of this segregation of cancer within families, for childhood cancers susceptibility syndromes, the affected child is often the first person in the family with the disease. This situation results from the child carrying a de novo heterozygous mutation in the dominant cancer susceptibility gene. For example, in the next section we review that 80% of children with bilateral retinoblastoma do not have a family history of the disease. As genomic technologies including whole-exome and whole-genome sequencing have evolved, there has been increasing recognition of children with hereditary forms of cancer even in the absence of family history.


Retinoblastoma

Much of our knowledge of autosomal dominant cancer families was gained from the study of retinoblastoma. In a landmark paper, Knudson hypothesized that bilateral retinoblastoma represented the hereditary form, and those patients had already acquired one “hit” or mutation.40 The best statistical model consistent with his data indicated that the bilateral form required only one additional hit after birth but that the unilateral form required two hits.

The most striking clinical features of autosomal dominant cancer predisposition disorders are those initially observed by Knudson: hereditary forms of retinoblastoma present earlier and with a greatly increased percentage of bilateral and multiple primary tumors (reviewed in Lonser23). Importantly, these patients are not exclusively bilateral, and variable expressivity results in approximately 15% of patients with unilateral retinoblastoma carrying a constitutional mutation. An even milder form, retinoma or retinocytoma, which spontaneously regress, can also be seen in apparently unaffected adults.41 Approximately 10% of people with a germline mutation in RB1 do not develop retinoblastoma, that is, incomplete penetrance.23 However, the penetrance varies among families, with specific mutations (often missense changes or splice abnormalities) resulting in mutation carriers having a higher likelihood of not developing retinoblastoma or having unilateral (as opposed to bilateral) disease. These types of families are said to demonstrate attenuated or low-penetrant retinoblastoma.






Figure 2.1 Knudson’s two-hit hypothesis. In all tumors, the same cell must undergo at least two mutations in the RB1 gene to become malignant. In sporadic, nonhereditary tumors (top), the first hit occurs at low frequency, with a rare cell having a second hit in the same gene yielding isolated tumors. In hereditary tumors (bottom), the first mutation is in a germ cell, such that all body cells have the first mutation. When a second mutation or inactivating event occurs in RB1 tumors develop. (From Plon SE. Cancer genetics and molecular oncology. In: Runge MS and Patterson C, eds. Principles of molecular medicine. 2nd ed. Totowa, NJ: The Humana Press, 2006.)

Individuals carrying germline mutations in the RB1 gene are at increased risk for development of other primary tumors, including osteosarcoma and malignant melanoma (both within and outside the radiation field) in childhood and leiomyosarcomas in adults. In a UK cohort of long-term survivors of bilateral retinoblastoma, there was a 48% risk of developing a second neoplasm by age 50.42 Further follow-up of this cohort (up to age 84) identified a 68% cumulative incidence of second cancers including many epithelial cancers, for example, lung cancer, at later ages as well as leiomyosarcomas which occur almost entirely in the retroperitoneum, bladder, and uterus with equal distribution of the sexes.43 Few individuals in the UK cohort received radiation therapy confirming that there is a significant risk of second primary cancers in all bilateral retinoblastoma patients. Data from a US cohort looking at cumulative cancer mortality (as opposed to incidence) identified 25% and 1% risk for hereditary and nonhereditary retinoblastoma, respectively.44 Analysis of this long-term US cohort also demonstrates that the addition of alkylating agents in children <1 year of age increased the risk of leiomyosarcoma.45 It is difficult to predict the outcomes from contemporary treatments. At 11 years of follow-up, 4% of patients with hereditary retinoblastoma receiving chemotherapy regimens consisting of carboplatin, vincristine, and etoposide demonstrated second malignancies.46 A study comparing retinoblastoma patients who received proton therapy with those receiving photon therapy (follow-up of 5 to 10 years) demonstrates a decreased risk of second cancers.47

The gene mutated in retinoblastoma, RB1, was identified on the basis of rare patients with cytogenetically visible deletions at 13q14.48 Molecular studies confirmed Knudson’s two-hit hypothesis. Retinoblastoma requires loss of both copies (i.e., two hits) of the RB1 gene for a tumor to develop (Fig. 2.1). In the familial form, a mutation in one RB1 gene is inherited, and therefore all the cells in the body have only one normal allele. If during development that normal copy is mutated or lost, then cell cycle control is disrupted and retinoblastoma can develop. The most common mechanisms by which the second copy is lost are loss of the whole chromosome, large deletions, and gene conversion normally resulting in loss of heterozygosity (LOH) for markers near the RB1 locus. Silencing of the gene by epigenetic methylation of the RB1 promoter can also occur. In the sporadic form of retinoblastoma,
mutation, silencing, or loss of both RB1 genes must occur in the same somatic retinal cell for retinoblastoma to develop.

Although bilateral retinoblastoma results from constitutional mutations in the RB1 gene, 80% will have no family history of retinoblastoma and result from de novo mutation in the RB1 gene. Surprisingly, parents of a child with bilateral retinoblastoma who have normal eye exams retain a 6% risk to have a second affected child due to the de novo mutation occurring in either the mother’s or father’s germline with a variable percentage of the eggs or sperm carrying the mutation (germline mosaicism).49 Therefore, all siblings of children with bilateral retinoblastoma should be evaluated by genetics and have ophthalmologic surveillance beginning at birth until the genetic status is clarified.

Several different molecular approaches are used to analyze the tumor and blood specimen of retinoblastoma patients to identify point mutations scattered throughout the gene, intragenic or whole-gene deletion, and promoter methylations.23 With extensive testing, clinical laboratories can identify the causative mutation in about 95% of bilateral cases where a blood sample is tested directly. Recent studies suggest that the remaining 5% of patients are most likely mosaic for the causative mutation with too few blood cells containing the mutation to be detected.49 Patients with a negative family history and unilateral disease have only a 15% a priori chance of having a germline RB1 mutation. A negative comprehensive RB1 mutation test from a blood sample from a unilateral patient will reduce this residual risk of hereditary disease to less than 1%. This risk can be further clarified by directly comparing RB1 results from tumor (when available) and blood.23 Examples of genetic test results and interpretation for unilateral retinoblastoma patients are shown in Table 2.3.

Genetic evaluation and testing is recommended for all retinoblastoma patients to first determine the hereditary nature and RB1 mutation status of the proband’s disease (whether unilateral or bilateral) and the need for retinoblastoma surveillance of at-risk relatives. Family members are offered familial RB1 mutation testing, a simplified test that is targeted to the specific RB1 mutation identified in the family, for any at-risk relative. For example, in work from Texas Children’s Hospital, 48 at-risk relatives of patients with documented hereditary retinoblastoma underwent genetic testing that revealed six positive individuals who require retinoblastoma surveillance and 42 relatives who were negative and thus did not require retinoblastoma surveillance and are not at risk of having children at-risk, substantially decreasing costs.50,51 If prenatal testing is not pursued, then any at-risk infant should have a careful eye examination within the first few weeks of life and a blood sample sent for analysis of the specific RB1 mutation found in the affected member of the family. Only those infants that carry the mutation need subsequent surveillance for retinoblastoma (see chapter on retinoblastoma). For adult long-term survivors of unilateral retinoblastoma, a positive test of a blood sample is found in approximately 12% of cases and is informative of a hereditary form of Rb and substantial risk to future children. Conversely, if comprehensive RB1 analysis of the blood is negative, then there is approximately a 0.5% to 1% residual risk for each offspring to develop retinoblastoma. Genetic testing of unilateral pediatric patients can be particularly informative for parents. If it can be documented that the child does not carry a constitutional RB1 mutation then (1) the child is not at substantial risk for secondary malignancies, (2) radiation therapy is associated with less hazard, and (3) the parents have a negligible risk of having another child with retinoblastoma. The child with unilateral retinoblastoma may carry some residual risk of having an affected child given the possibility of mosaicism.49 A coordinated team of oncologists, ophthalmologists, pathologists, and genetics professionals facilitates the delivery of optimal care for families with a child diagnosed with retinoblastoma.








TABLE 2.3 Examples of RB1 Genetic Test Results for Two Patients with Unilateral Retinoblastoma































Patient 1


Sample


Allele 1


Allele 2


Tumor 1


p.Q347X


Loss


Blood 1


p.Q347X


Normal


Patient 1: Interpretation—This child has the hereditary form of retinoblastoma with the p.Q347X mutation as the first, inherited hit and loss of the gene as the second hit in the tumor. Testing of siblings (and future offspring) for the Q347X mutation will identify those at significant risk of retinoblastoma and the need for appropriate surveillance.


Patient 2


Tumor 2


Methylation of Promoter


c.567delAG


Blood 2


Normal


Normal


Patient 2: Interpretation—Neither of the two “hits” seen in the tumor is found in the blood. This confirms a sporadic cause of retinoblastoma. Siblings are not at risk for developing retinoblastoma and do not need genetic testing or surveillance. Future offspring are at low risk and can be directly tested for the 567delAG mutation after birth.



Inherited TP53 Mutations, the Li-Fraumeni Syndrome, and Its Variant Phenotypes

In 1969, an inherited cancer predisposition syndrome was reported by Li and Fraumeni on the basis of characterization of four families in which at least two cases of sarcoma occurred in early life.52 The list of LFS tumors includes premenopausal breast cancer, brain tumors, leukemias, adrenocortical carcinomas (ACC), gastric cancer, lymphoma, CPC, colorectal cancer, and possibly early onset lung cancer.53 “Classic” LFS is defined by a proband with sarcoma diagnosed below age 45 years, who has a first-degree relative with any cancer below 45 years, plus another first or second-degree relative with either any cancer below 45 years or a sarcoma at any age. An example of an LFS pedigree is shown in Figure 2.2. The criteria for families that do not quite meet classic criteria, termed LFS-Like (LFS-L), are generally accepted to include those outlined by the revised Chompret criteria54 to include all children with ACC or CPC regardless of family history; a family in which the proband has multiple tumors, two of which are classical LFS tumors and the first occurred before age 46 years; or a family in which the proband has a characteristic LFS tumor diagnosed below age 46 and has at least two first- or second-degree relatives with an LFS component tumor (other than breast cancer if the proband had breast cancer). TP53 mutation carriers exhibit greater than 80-fold increased risk of developing multiple synchronous or metachronous non-therapy-induced neoplasms.55 In particular, the overall relative risk of occurrence of a second cancer was 5.3
(95% CI = 2.8-7.8), with a cumulative probability of second cancer occurrence of 57%.






Figure 2.2 Pedigree of a family with Li-Fraumeni syndrome. Filled circles/squares represent affected members; circles with slashes represent deceased family members. Numbers represent age at diagnosis. BB, bilateral breast cancer; CNS, brain tumor; BR, unilateral breast cancer; LK, leukemia; CPC, choroid plexus carcinoma; RMS, rhabdomyosarcoma; OS, osteosarcoma.

In 1990, Malkin and colleagues detected heterozygous point mutations in the TP53 gene in constitutional DNA in all of five LFS kindreds.56 However, numerous subsequent studies have shown that only 60% to 80% of “classic” LFS families harbor germline TP53 mutations (see, for example, in Ref. 57) while the majority of LFS-L families do not have detectable TP53 mutations (see, for example, in Ref. 54). Mutations occur throughout the TP53 gene, though they are primarily confined to highly conserved regions. Intragenic deletions of the TP53 gene have been reported in a subset of families that had negative sequencing studies.58 In some patients, the tumors do not demonstrate LOH and the TP53 mutation is thought to act in a dominant negative form.59

The cancer phenotype in LFS is quite diverse. While specific TP53 genotype:phenotype correlations have not been clearly demonstrated, several genetic modifier effects are reported. In particular, the mean age of onset of tumors is significantly less in TP53 mutation carriers who carry an MDM2 SNP309 G allele compared with those homozygous for the T allele.58 Similarly, carriers of the TP53 codon 72 Arginine allele have an earlier tumor onset than those who harbor a homozygous Proline allele.58 The cumulative combination of MDM2 SNP309 and TP53 codon 72 status, telomere length in peripheral blood cells, and possibly specific TP53 mutations may eventually be used as a predictive biomarker for cancer type and age of onset in LFS.60 DNA copy number variation (CNV) is strikingly enriched in the constitutional DNA of TP53 mutation carriers, and these CNVs can be inherited and frequently encompass other cancer genes, suggesting that the genomic instability conferred by the TP53 mutation can be transmitted from generation to generation.61 The potential role of telomere attrition and aberrant CNVs is exemplified by evidence that demonstrates chromothripsis (chromosome shattering and reshuffling) in tumors, such as medulloblastomas, from patients harboring germline TP53 mutations.62

A large number of studies have analyzed groups of patients with tumors characteristic of LFS, yet lacking characteristic family histories of cancer, for germline TP53 mutations. A few examples are provided here. For example, mutations have been identified in approximately 50% of children with ACC,63 10% of children with osteosarcoma,64 and 10% of children with rhabdomyosarcoma.65 In the latter study, the age average of onset (22 months) was lower for TP53 mutation carriers. Strikingly, 75% of children with anaplastic RMS harbor germline TP53 mutations.66 Furthermore, one-third of children with sarcomas plus either multiple primary tumors, or a significant family history of cancer have germline TP53 mutations.67 Studies reveal that more than 90% of ACC patients from Brazil carry the TP53 R337H missense mutation as a founder mutation.68 ACC diagnoses are overrepresented in families carrying this mutation; however, many Brazilian families exhibit the classic LFS phenotype of multiple cancer types.69 Evidence that germline TP53 mutations are associated with specific subtypes of childhood cancer was further validated by the recent finding that apparently germline TP53 mutations were identified in 50% of children with the rare hypodiploid form of ALL.70

Presymptomatic molecular testing for TP53 germline mutations in members of LFS kindreds has been met with significant controversy. A major step forward came with the report of early tumor detection with favorable impact on survival in a small cohort of childhood and adult TP53 mutation carriers screened using a comprehensive tumor surveillance protocol.71 This protocol (often referred to as the “Toronto Protocol”) uses a combination of annual rapid sequence whole-body magnetic resonance imaging (MRI), dedicated brain and breast (for young adult) MRI, and frequent abdominal/pelvic ultrasounds and several biochemical assays in at-risk individuals (see Table 2.4). Relatively long-term follow-up has demonstrated that the approach is feasible and offers a significant survival advantage and reduced treatment morbidity when compared with carriers who do not undergo surveillance. The Toronto protocol does not include PET-CT evaluation, although a few anecdotal reports of detection of ACC with PET-CT imaging have been published in children with LFS.72,73 With the implementation of the Toronto protocol, many additional centers are beginning presymptomatic testing of children at risk for TP53 mutations. Clinical evaluation of children at increased genetic risk for cancer is discussed further in the last section of this chapter.


Inheritance of an Alteration in MicroRNA Processing: DICER1

The advent of novel gene discovery platforms as well as astute recognition of emerging phenotypes has led to the recognition of new syndromes. One of these, DICER1 syndrome (or pleuropulmonary blastoma familial tumor dysplasia syndrome), is characterized by a phenotypic association of distinctive dysontogenic, hyperplastic, or overtly malignant tumors. The most frequent of these is pleuropulmonary blastoma (PPB). Other manifestations include ovarian Sertoli-Leydig cell tumors (SLCT), nodular thyroid hyperplasia, pituitary blastoma, pineoblastoma, papillary and follicular thyroid carcinoma, cervical rhabdomyosarcoma, cystic nephroma, and WT.74 Most of these tumors appear to manifest in childhood, although the thyroid tumor risk and multinodular goiter may persist through adulthood. DICER1 is an endoribonuclease that processes hairpin precursor microRNAs (miRNAs) into short, functional miRNAS. Mature 5′ miRNAs as well as other components of the RNA-induced silencing complex (RISC) down-regulate targeted mRNAs.75 Germline DICER1 mutations have been identified in children and young adults affected with one or several of these tumors.76

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Aug 25, 2016 | Posted by in ONCOLOGY | Comments Off on Childhood Cancer and Heredity

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