Antibody Diversity



Antibody Diversity


Learning Objectives



• Recognize the three theories that explain antibody diversity


• Compare and contrast genes that code for light chains and heavy chains


• Recognize the key features of combinatorial diversity


• Explain the biologic function of complementarity regions 1, 2, and 3


• Discuss the role of the recognition signal sequence (RSS) in recombination


• Relate the biologic significance of the 12/23 rule in the recombination of V(D)J genes


• Understand the role of RAG-1 and RAG-2 in recombination


• Identify the role of the Artemis enzyme in recombination


• Understand how messenger ribonucleic acid (mRNA) slicing attaches C regions to VJ or VDJ


• Define junctional diversity


• Relate junctional diversity to the antigen-combining pocket


• Compare and contrast recombination events conferring diversity in the T cell receptor (TCR), B cell receptor (BCR), and antibodies


• Compare and contrast the functions of P-nucleotides and N-nucleotides in generating junctional diversity


• Identify the definition of allelic exclusion


• Explain the role of affinity maturation in immune response


Key Terms


Affinity maturation


Allelic exclusion


Artemis


Combinatorial diversity


Deoxynucleotidyl transferase


Junctional diversity


Ligase


Messenger ribonucleic acid (mRNA) splicing


Nonhomologous end joining


One turn–two turn rule


P-nucleotides and N-nucleotides


RAG enzymes


Recognition signal sequences


Somatic mutation


Signal joints


Introduction


Three theories have been put forth to explain antibody diversity, which allows B cells to generate an antibody repertoire capable of reacting with a wide range of antigens: (1) The germ-line theory postulates that separate genes exist for each antibody molecule and that the antibody repertoire is largely inherited. (2) The deoxyribonucleic acid (DNA) rearrangement theory proposes that a limited number of genes undergo genetic rearrangements to create antibody populations. (3) Finally, the somatic mutation theory proposes that a limited number of inherited genes undergo mutations to general antibody repertoires. In vivo and in vitro studies have demonstrated that both the DNA rearrangement theory and the somatic mutation theory provide the most plausible explanations for antibody diversity.


Antibodies are encoded by different germ-line genetic loci. Variable (V) region, joining (J) region, and constant (C) region gene products are assembled into a functional antibody. Variable portion genes (V) code for amino acids that constitute the framework regions of the variable region, and three hypervariable complementarity-determining regions (CDR1, CDR2, and CDR3). The hypervariable regions form the three-dimensional antigen-binding pocket. Antibody specificity is determined by the specific amino acid sequences in CDR3. The joining (J) segment is, in reality, part of the V region and provides some of the framework for the antigen-binding pocket. Only heavy chains have an additional diversity (D) gene.


Antibody diversity is generated from the large number of V, J, D, and C genes available for recombination. Light-chain loci have 30 to 35 genes encoding for the variable (VL) regions (Table 10-1). Five to seven genes code for JL segments in kappa (κ) or lambda (λ) light chains, respectively. Lambda and kappa light chains have one highly conserved constant region.



Heavy chains are larger than the light chains. A hundred genes code for heavy-chain variable (VH) regions. Diversity (D) genes (N=23) are inserted between V and J genes. J genes (N=5) are linked to the constant region (N=5). The constant region may be from one of the five antibody isotypes (mu [μ], gamma [γ], alpha [α], epsilon [ε], or delta [δ]). An assembled heavy chain consists of VJDC gene products (Figure 10-1).



Combinatorial Diversity

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Jun 18, 2016 | Posted by in IMMUNOLOGY | Comments Off on Antibody Diversity

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