and Winfried G. Rossmanith2
(1)
Lenzkirch, Germany
(2)
Ettlingen, Germany
16.1 List of Species
16.2 Glossary
16.2.1 Cell Components
16.2.2 Cell Structure
16.2.4 Additional Definitions
16.2.5 Amino Acids
16.3 PyMOL Scripts
16.3.1 Glycoprotein Hormone α Chain
16.3.3 CYP51
16.3.4 CYP19
16.1 List of Species
Table 16.1
Species
Scientific name | Vernacular name | Superior taxon | Class/phylum |
---|---|---|---|
Acheta domesticus | House cricket | Gryllidae | Insecta |
Achlya ambisexualis | Peronosporomycetes | Fungi | |
Acyrthosiphon pisum | Pea aphid | Aphidoidea | Insecta |
Aedes aegyptii | Yellow fever mosquito | Culicidae | Insecta |
Aeshna cyanea | Blue-eyed darner | Odonata | Insecta |
Agelenopsis aperta | Desert grass spider | Agelenidae | Arachnida |
Agrotis ipsilon | Dark sword-grass | Noctuidae | Insecta |
Anopheles gambiae | Culicidae | Insecta | |
Apis melifera | Honeybee | Apidae | Insecta |
Aplysia californica | California sea hare | Anaspidea | Mollusca |
Aplysia kurodai | Kuroda’s sea hare | Anaspidea | Mollusca |
Armadillidium vulgare | Common pill bug | Isopoda | Crustacea |
Bombyx mori | Silk moth | Lepidoptera | Insecta |
Brugia malayi | Filarioidea | Nematoda | |
Busycon contrarium | Lightning whelk | Neogastropoda | Mollusca |
Caenorhabditis elegans | Rhabditida | Nematoda | |
Callinectes sapidus | Atlantic blue crab | Brachyura | Malacostraca |
Cancer magister | Dungeness crab | Brachyura | Malacostraca |
Carausius morosus | Indian stick insect | Neoptera | Insecta |
Carcinus maenas | European shore crab | Brachyura | Malacostraca |
Ciona intestinalis | Vase tunicate | Cionidae | Urochordata |
Dipetalogaster maxima | (Blood sucking bug) | Heteroptera | Insecta |
Drosophila melanogaster | Fruit fly | Neoptera | Insecta |
Eisenia fetida | Redworm | Lumbricidae | Annelida |
Euphyllia anchora | Anchor coral | Scleractinia | Cnidaria |
Helicoverpa armigera | Cotton bollworm | Noctuidae | Insecta |
Helicoverpa assulta | Oriental tobacco budworm | Noctuidae | Insecta |
Helicoverpa zea | Cotton earworm | Noctuidae | Insecta |
Helix aspersa | Garden snail | Pulmonata | Gastropoda |
Helix pomatia | Burgundy snail | Pulmonata | Gastropoda |
Homarus americanus | American lobster | Astacidea | Malacostraca |
Leucophaea maderae | Madeira cockroach | Blattodea | Insecta |
Locusta migratoria | Migratory locust | Cealifera | Insecta |
Lumbricus terrestris | Common earthworm | Lumbricidae | Annelida |
Lymnea stagnalis | Great pond snail | Pulmonata | Gastropoda |
Macrobrachium rosenbergii | Giant river prawn | Caridea | Malacostraca |
Macrocallista nimbosa | Sunray Venus clam | Veneroida | Bivalvia |
Manduca sexta | Tobacco hornworm | Lepidoptera | Insecta |
Mytilus edulis | Blue mussel | Mytiloida | Bivalvia |
Neobellieria bullata | Grey flesh fly | Neoptera | Insecta |
Oncopeltus fasciatus | Mildweed bug | Hemiptera | Insecta |
Orconectes immunis | Calico crayfish | Astacidea | Malacostraca |
Orconectes limosus | Spiny-cheek crayfish | Astacidea | Malacostraca |
Pagurus bernhardus | Common hermit crab | Pleocyemata | Malacostraca |
Pandalus borealis | Great northern prawn | Caridea | Malacostraca |
Pandalus jordani | Pacific/ocean shrimp | Caridea | Malacostraca |
Pacifastacus leniusculus | Signal crayfish | Astacidea | Malacostraca |
Penaeus aztecus | Brown shrimp | Penaeidae | Malacostraca |
Penaeus japonicus | Kuruma prawn | Penaeidae | Malacostraca |
Penaeus vannamei | Pacific white shrimp | Penaeidae | Malacostraca |
Phormia regina | Black blow fly | Neoptera | Insecta |
Procambarus clarkii | Red swamp crayfish | Astacidea | Malacostraca |
Psacothea hilaris | Yellow spotted longicorn beetle | Neoptera | Insecta |
Rhodnius prolixus | (Triatomid bug) | Heteroptera | Insecta |
Romalea microptera | Eastern lubber grasshopper | Caelifera | Insecta |
Schistocerca gregaria | Desert locust | Caelifera | Insecta |
Schistocerca nitens | Gray bird grasshopper | Caelifera | Insecta |
Strongylocentrotus purpuratus | Purple sea urchin | Echinoida | Echinodermata |
Tenebrio molitor | Mealworm | Coeleoptera | Insecta |
Tribolium castaneum | Red flour beetle | Coeleoptera | Insecta |
Trichoplax adhaerens | – | Placozoa | |
Uca puligator | Sand fiddler crab | Brachyura | Malacostraca |
16.2 Glossary
16.2.1 Cell Components
ATP:
Adenosine triphosphate (ATP) is a molecule generated during intracellular oxidation of glucose and which stores energy. By enzymatic transfer of phosphate, the energy is also transferred.
Cyclic AMP:
Cyclic adenosine monophosphate (cAMP) is generated from ATP by adenylate cyclase . Adenylate cyclase is, for example, stimulated by the hormone glucagon. Within the cell, cAMP has function a hormone has in the organism: it is a messenger. With hormones seen as primary messengers, cAMP is the prototype of second messengers. Other second messengers are cyclic guanosine monophosphate, diacyl glycerol , inositol trisphosphate, and nitrogen monoxide.
Enzymes:
Enzymes are protein molecules performing chemical reactions.
Molecules:
A cell consists of amino acids, proteins, glycerol derivatives, fatty acids, lipids, large and small sugar molecules, deoxyribonucleic acid (DNA), ribonucleic acid (RNA), and a multitude of other substances, such as vitamins, salts, trace elements, and other organic compounds. To obtain information about all these substances, please consult a biochemistry textbook.
Nucleic acids:
Nucleic acids are built with a chain where a sugar and a phosphate alternate. To each sugar a so-called base is linked, the sequence of the base determining genetic information. Two different sugars are used differing from each other by a single oxygen atom. Genetic information in all living cells from bacteria to plants to animals consists of DNA using deoxyribose with four bases—adenine, cytidine, guanine, and thymine. Within the cell, information from the cellular nucleus is transcribed into RNAs built with a ribose phosphate backbone and where together with adenine, cytidine and guanine, uracil is used instead of thymine. There are functionally different RNAs: messenger RNA (mRNA), ribosomal RNA, and transfer RNA (tRNA).
In viruses, genetic information consists of DNA or RNA.
Proteins:
Proteins are described in detail in Chap. 4